Imprinted gene enrichment testing

Test DMRs for overlaps with human imprinted genes from https://www.geneimprint.com/site/genes-by-species.Homo+sapiens.imprinted-All

Usage

imprintOverlap(
  sigRegions = sigRegions,
  regions = regions,
  TxDb = TxDb,
  annoDb = annoDb
)

Arguments

sigRegions

GRanges object of DMRs.

regions

GRanges object of background regions.

TxDb

TxDb annotation package for genome of interest.

annoDb

Character specifying OrgDb annotation package for species of interest.

Value

A printed statement with the enrichment results.

Details

imprintOverlap